Resilience of genetic diversity in forest trees over the Quaternary
Milesi, Pascal; Kastally, Chedly; Dauphin, Benjamin; Cervantes, Sandra; Bagnoli, Francesca; Budde, Katharina B; Cavers, Stephen; Fady, Bruno; Faivre-Rampant, Patricia; González-Martínez, Santiago C; Grivet, Delphine; Gugerli, Felix; Jorge, Véronique; Lesur Kupin, Isabelle; Ojeda, Dario I; Olsson, Sanna; Opgenoorth, Lars; Pinosio, Sara; Plomion, Christophe; Rellstab, Christian; Rogier, Odile; Scalabrin, Simone; Scotti, Ivan; Vendramin, Giovanni G; Westergren, Marjana; Lascoux, Martin; Pyhäjärvi, Tanja; On behalf of the GenTree Consortium (2024-10-14)
Milesi, Pascal
Kastally, Chedly
Dauphin, Benjamin
Cervantes, Sandra
Bagnoli, Francesca
Budde, Katharina B
Cavers, Stephen
Fady, Bruno
Faivre-Rampant, Patricia
González-Martínez, Santiago C
Grivet, Delphine
Gugerli, Felix
Jorge, Véronique
Lesur Kupin, Isabelle
Ojeda, Dario I
Olsson, Sanna
Opgenoorth, Lars
Pinosio, Sara
Plomion, Christophe
Rellstab, Christian
Rogier, Odile
Scalabrin, Simone
Scotti, Ivan
Vendramin, Giovanni G
Westergren, Marjana
Lascoux, Martin
Pyhäjärvi, Tanja
On behalf of the GenTree Consortium
Springer
14.10.2024
Milesi, P., Kastally, C., Dauphin, B. et al. Resilience of genetic diversity in forest trees over the Quaternary. Nat Commun 15, 8538 (2024). https://doi.org/10.1038/s41467-024-52612-y.
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© The Author(s) 2024. This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/.
https://creativecommons.org/licenses/by/4.0/
© The Author(s) 2024. This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/.
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Julkaisun pysyvä osoite on
https://urn.fi/URN:NBN:fi:oulu-202410166349
https://urn.fi/URN:NBN:fi:oulu-202410166349
Tiivistelmä
Abstract
The effect of past environmental changes on the demography and genetic diversity of natural populations remains a contentious issue and has rarely been investigated across multiple, phylogenetically distant species. Here, we perform comparative population genomic analyses and demographic inferences for seven widely distributed and ecologically contrasting European forest tree species based on concerted sampling of 164 populations across their natural ranges. For all seven species, the effective population size, Ne, increased or remained stable over many glacial cycles and up to 15 million years in the most extreme cases. Surprisingly, the drastic environmental changes associated with the Pleistocene glacial cycles have had little impact on the level of genetic diversity of dominant forest tree species, despite major shifts in their geographic ranges. Based on their trajectories of Ne over time, the seven tree species can be divided into three major groups, highlighting the importance of life history and range size in determining synchronous variation in genetic diversity over time. Altogether, our results indicate that forest trees have been able to retain their evolutionary potential over very long periods of time despite strong environmental changes.
The effect of past environmental changes on the demography and genetic diversity of natural populations remains a contentious issue and has rarely been investigated across multiple, phylogenetically distant species. Here, we perform comparative population genomic analyses and demographic inferences for seven widely distributed and ecologically contrasting European forest tree species based on concerted sampling of 164 populations across their natural ranges. For all seven species, the effective population size, Ne, increased or remained stable over many glacial cycles and up to 15 million years in the most extreme cases. Surprisingly, the drastic environmental changes associated with the Pleistocene glacial cycles have had little impact on the level of genetic diversity of dominant forest tree species, despite major shifts in their geographic ranges. Based on their trajectories of Ne over time, the seven tree species can be divided into three major groups, highlighting the importance of life history and range size in determining synchronous variation in genetic diversity over time. Altogether, our results indicate that forest trees have been able to retain their evolutionary potential over very long periods of time despite strong environmental changes.
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