Genetic basis of adaptation: bud set date and frost hardiness variation in Scots pine

Abstract

<div lang="en" class="abs"><p class="abs_header">Abstract</p><p>The genetic basis of large adaptive differences in timing of bud set and frost hardiness between natural populations of Scots pine (<em>Pinus sylvestris</em> L.) was studied with the aid of RAPD markers and quantitative genetic tools. Steep clinal variation was found for both traits among Finnish Scots pine populations, and the differences between populations were found to be largely genetic. QTL mapping with Bayesian analysis revealed four potential QTLs for timing of bud set, and seven for frost hardiness. The QTLs were mostly different between the two traits. The potential QTLs included loci with large effects, and additionally smaller QTLs. The largest QTLs for bud set date accounted for about a fourth of the mean difference between populations. Thus, natural selection during adaptation has resulted in fixation of genes of large effect. This result is in conflict with the classical infinitesimal model, but agrees with the results of Orr (1998), suggesting fixation of large effects during adaptation.</p><p>The applicability of RAPD and SSCP markers in quantitative genetic studies was also studied. The SSCP technique was found to be efficient in finding polymorphic markers. SSCP polymorphism in coding genes may provide candidate genes for QTL mapping studies. RAPDs were found to be useful for many descriptive analyses, but specific analyses would require more caution.</p></div>