Discovery and analysis of RNA viruses in insects

Viljakainen, Lumi; Jurvansuu, Jaana (2020-01-28)
 
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https://doi.org/10.1007/978-1-0716-0259-1_12

Viljakainen, Lumi
Jurvansuu, Jaana
Humana Press
28.01.2020

Viljakainen L., Jurvansuu J. (2020) Discovery and Analysis of RNA Viruses in Insects. In: Sandrelli F., Tettamanti G. (eds) Immunity in Insects. Springer Protocols Handbooks. Humana, New York, NY. https://doi.org/10.1007/978-1-0716-0259-1_12

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© Springer Science+Business Media, LLC, part of Springer Nature 2020. This is a post-peer-review, pre-copyedit version of an article published in Springer Protocols Handbooks. The final authenticated version is available online at https://doi.org/10.1007/978-1-0716-0259-1_12.
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doi:https://doi.org/10.1007/978-1-0716-0259-1_12
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Abstract

Viruses are the most abundant pathogens on Earth infecting all cellular life forms. Only in recent years have we started to gain knowledge on insect viromes, thanks to the development of sequencing technologies. The discovery and characterization of insect viruses is important for understanding insect-virus interactions, coevolution, and insect immune defenses. We describe here a bioinformatic pipeline for the discovery of RNA viruses from insects based on RNA sequence data and the analysis of insect antiviral immune response against the discovered viruses by using small RNA sequence data.

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